PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Gene Ontology |

Function |

Regulation |

Orthologous Group |

Publication

Basic Information? help Back to Top

TF ID

PDK_30s971691g003

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

VOZ

Protein Properties

Length: 494aa MW: 55483.6 Da PI: 6.4499

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s971691g003	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	437	2.5e-134	202	418	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 pppsafl pkcalwdc+rpa+gsew+qdycssfhatlal+eg+pg+tpvlrp+gidlkdg+lfaal+ak+qgk+vgipecegaatakspwna PDK_30s971691g003 202 PPPSAFLMPKCALWDCPRPARGSEWYQDYCSSFHATLALHEGPPGMTPVLRPGGIDLKDGPLFAALTAKTQGKNVGIPECEGAATAKSPWNA 293 89**************************************************************************************** PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyr 184 +elfdl +l+ge++rewlffdkprrafesgnrkqrslpdy+grgwhesrkqvmkefgglkrsyymdpqp++++ewhlyeyein +d++alyr PDK_30s971691g003 294 PELFDLLVLNGESLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGLKRSYYMDPQPLNHYEWHLYEYEINYCDSCALYR 385 **************************************************************************************** PP VOZ 185 lelklvdekksakgkvskdsladlqkklgrlta 217 le+klvd +ksakgkv++dsl+dlq+++grl+a PDK_30s971691g003 386 LEFKLVDPNKSAKGKVMTDSLVDLQQQMGRLNA 418 ****************************986 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence Send to blast
MRKGSKSGAC RSAAHGLLKE RAKNRVDDLQ GMLSDLQAAR KESRAADAAL LEEQVHQMLR 60 EWKAELDEAS PASSLLAELG AEAVHTSFDT ADIGLMESQN MLNQRMKSAI LLCKYFPNLE 120 YFVSQELPEH GCLGAEQYKS SLSTGVQQAA LNYLEGNTNS DYQQFSLHQE LHHNVFIGFD 180 DSRKNGGAVV PLISEFIPAI CPPPSAFLMP KCALWDCPRP ARGSEWYQDY CSSFHATLAL 240 HEGPPGMTPV LRPGGIDLKD GPLFAALTAK TQGKNVGIPE CEGAATAKSP WNAPELFDLL 300 VLNGESLREW LFFDKPRRAF ESGNRKQRSL PDYNGRGWHE SRKQVMKEFG GLKRSYYMDP 360 QPLNHYEWHL YEYEINYCDS CALYRLEFKL VDPNKSAKGK VMTDSLVDLQ QQMGRLNAEN 420 PLDNKQYIKG RVKVKQKDAD ENACLASNMV NQREHSQKLY STLDQKAPID ENLGYGPSMP 480 YAYSVDNLKN YYGT

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence Send to blast

MRKGSKSGAC RSAAHGLLKE RAKNRVDDLQ GMLSDLQAAR KESRAADAAL LEEQVHQMLR  60
EWKAELDEAS PASSLLAELG AEAVHTSFDT ADIGLMESQN MLNQRMKSAI LLCKYFPNLE  120
YFVSQELPEH GCLGAEQYKS SLSTGVQQAA LNYLEGNTNS DYQQFSLHQE LHHNVFIGFD  180
DSRKNGGAVV PLISEFIPAI CPPPSAFLMP KCALWDCPRP ARGSEWYQDY CSSFHATLAL  240
HEGPPGMTPV LRPGGIDLKD GPLFAALTAK TQGKNVGIPE CEGAATAKSP WNAPELFDLL  300
VLNGESLREW LFFDKPRRAF ESGNRKQRSL PDYNGRGWHE SRKQVMKEFG GLKRSYYMDP  360
QPLNHYEWHL YEYEINYCDS CALYRLEFKL VDPNKSAKGK VMTDSLVDLQ QQMGRLNAEN  420
PLDNKQYIKG RVKVKQKDAD ENACLASNMV NQREHSQKLY STLDQKAPID ENLGYGPSMP  480
YAYSVDNLKN YYGT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008784453.1	0.0	transcription factor VOZ1-like isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2H3XIZ0	0.0	A0A2H3XIZ0_PHODC; transcription factor VOZ1-like isoform X1
STRING	XP_008784453.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-170	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]