 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PDK_30s942051g002 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
NAC |
| Protein Properties |
Length: 302aa MW: 34410.7 Da PI: 6.803 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s942051g002 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 166.6 | 8.4e-52 | 13 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrFhPtdeelv +yL+kkv+ ++l++ +i+evd+yk++Pw+Lp k+ +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v
PDK_30s942051g002 13 LPPGFRFHPTDEELVLHYLCKKVAYQPLPV-PIIAEVDLYKYDPWELPDKALFGRREWYFFTPRDRKYPNGSRPNRAAGKGYWKATGADKPV 103
79****************************.88***************77778999************************************ PP
NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + + + g+kk Lvfy+g+ap+g ktdW+mheyrl
PDK_30s942051g002 104 VPRgSARPLGIKKALVFYSGKAPRGLKTDWIMHEYRL 140
*9856677***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MGRRRDAEAE LNLPPGFRFH PTDEELVLHY LCKKVAYQPL PVPIIAEVDL YKYDPWELPD 60
KALFGRREWY FFTPRDRKYP NGSRPNRAAG KGYWKATGAD KPVVPRGSAR PLGIKKALVF 120
YSGKAPRGLK TDWIMHEYRL AGTNRATNKG SLKLDEWVLC RLYNKKNTWE KMQQQKEEAS 180
FGETMDSLDD TGSDSFRTPE SDIDNDVVLP DFDDMGRLGA YPSQASKGIQ AARASSTAGS 240
QLPAMEQRQK EENEWFMDLK LDDLQSSYMA FGSASAPDML SQDYYTSNLP QLRSNQNDLP 300
PF
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress (PubMed:18813954, PubMed:20632034). Induced by dehydration, cold stress and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Taga Y, et al.
Role of OsHSP90 and IREN, Ca2+ dependent nuclease, in plant hypersensitive cell death induced by transcription factor OsNAC4.
Plant Signal Behav, 2009. 4(8): p. 740-2
[PMID:19820348] - Xia N, et al.
Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses.
Mol. Biol. Rep., 2010. 37(8): p. 3703-12
[PMID:20213512] - Takasaki H, et al.
The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice.
Mol. Genet. Genomics, 2010. 284(3): p. 173-83
[PMID:20632034] - Nakayama A, et al.
Genome-wide identification of WRKY45-regulated genes that mediate benzothiadiazole-induced defense responses in rice.
BMC Plant Biol., 2013. 13: p. 150
[PMID:24093634] - Ootsubo Y,Hibino T,Wakazono T,Mukai Y,Che FS
IREN, a novel EF-hand motif-containing nuclease, functions in the degradation of nuclear DNA during the hypersensitive response cell death in rice.
Biosci. Biotechnol. Biochem., 2016. 80(4): p. 748-60
[PMID:26766411]
|
