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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PDK_30s929081g002 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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| Family |
LBD |
| Protein Properties |
Length: 188aa MW: 20500.7 Da PI: 9.0835 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s929081g002 | genome | PDK | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 146.9 | 5.6e-46 | 13 | 112 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92
+CaaCk+lrr+Ca+dC++apyfpa++p+kfanvhk+FGasnv+kll++lp ++r+da+sslvyeA+ar+rdPvyG+vg i++lq+q+e l++
PDK_30s929081g002 13 PCAACKLLRRRCAQDCIFAPYFPADEPQKFANVHKVFGASNVSKLLQELPAHHRSDAVSSLVYEANARVRDPVYGCVGAISSLQRQIEALQT 104
7******************************************************************************************* PP
DUF260 93 elallkee 100
+la +++e
PDK_30s929081g002 105 QLAIAQAE 112
***99986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MRELGRKQGT VSPCAACKLL RRRCAQDCIF APYFPADEPQ KFANVHKVFG ASNVSKLLQE 60
LPAHHRSDAV SSLVYEANAR VRDPVYGCVG AISSLQRQIE ALQTQLAIAQ AEMVHLRTRH 120
AAYLAHLSSR SPMVVGMTST GAGTASSSMS LPKQQLMKPD QHGPKPLFAL DMVMVDQTSL 180
GEPPIWSC
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