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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PDK_30s921311g005 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
NAC |
| Protein Properties |
Length: 260aa MW: 29586.3 Da PI: 8.42 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s921311g005 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 127.6 | 1e-39 | 5 | 154 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.......................kvka.eekewyfFskrdkky 68
ppG+rF Pt+eel+ +yL++k+e+k+l++ e i+ v++y+++P++Lp+ + + + ++w+fF++r++++
PDK_30s921311g005 5 PPGLRFYPTEEELLGFYLRNKLENKRLKEMERyIPVVGVYSYDPEQLPReilhlldlqmclfsillttmsgeA-SIrDPEQWFFFCPRQERE 95
8*************************7776656***************6699********9999998765531.2224569*********** PP
NAM 69 atgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
a+g +++r+t sgyWk tg+ +vls+++ +g kkt+vfy+grap+g+kt+W m+ey+
PDK_30s921311g005 96 ARGGKPTRTTPSGYWKVTGSPGHVLSSQNLRIGWKKTMVFYTGRAPTGTKTKWKMNEYK 154
**************************99999***************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MTDQPPGLRF YPTEEELLGF YLRNKLENKR LKEMERYIPV VGVYSYDPEQ LPREILHLLD 60
LQMCLFSILL TTMSGEASIR DPEQWFFFCP RQEREARGGK PTRTTPSGYW KVTGSPGHVL 120
SSQNLRIGWK KTMVFYTGRA PTGTKTKWKM NEYKALEEAA ASTSTTPPRL RNEFSVCRVY 180
IKSGTLRSFD RRPSASIAMN YSESQRRNPE ASSSANPQIA DQRTSSHGSS SPGDDGSQPL 240
AAGATFDWDM LEDIIYPEQF
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-29 | 5 | 185 | 18 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-29 | 5 | 185 | 18 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-29 | 5 | 185 | 18 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-29 | 5 | 185 | 18 | 168 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 6e-29 | 5 | 185 | 21 | 171 | NAC domain-containing protein 19 |
| 3swm_B | 6e-29 | 5 | 185 | 21 | 171 | NAC domain-containing protein 19 |
| 3swm_C | 6e-29 | 5 | 185 | 21 | 171 | NAC domain-containing protein 19 |
| 3swm_D | 6e-29 | 5 | 185 | 21 | 171 | NAC domain-containing protein 19 |
| 3swp_A | 6e-29 | 5 | 185 | 21 | 171 | NAC domain-containing protein 19 |
| 3swp_B | 6e-29 | 5 | 185 | 21 | 171 | NAC domain-containing protein 19 |
| 3swp_C | 6e-29 | 5 | 185 | 21 | 171 | NAC domain-containing protein 19 |
| 3swp_D | 6e-29 | 5 | 185 | 21 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 5e-29 | 5 | 185 | 18 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 5e-29 | 5 | 185 | 18 | 168 | NAC domain-containing protein 19 |
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