PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s920981g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 274aa    MW: 29975.5 Da    PI: 4.608
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s920981g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.26.2e-0827591955
                       HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       +f+ Lr+l+P++    ++K +Ka+ L +++eY+k Lq
  PDK_30s920981g003 27 RFQILRDLIPHS----DQKRDKASFLLEVIEYVKFLQ 59
                       79*********9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.11E-72763No hitNo description
SuperFamilySSF474591.26E-92769IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-122775IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-52759IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MGADLAYRPY QLLSIDKISW LHLRMGRFQI LRDLIPHSDQ KRDKASFLLE VIEYVKFLQE  60
KVQKYEYQGW GQENAKLMPW SNSQGPTDGL SDPSHVLKNG PVPPGFMFSG KFVDNSIPIA  120
PTMLSNTQNV AEPDMNTGTG AVLAPCASVG RESGLTLPQE RLISDSDNMA SHAQSQWQRS  180
SGPADCTIGS DMLNIQEELA IDEGTISVSS VYTQGTSKVI SVLPQIPFGS ASPISQAEDL  240
EDPSAFNQAM EDSRVGSSGE ESEQAPKRHK TDKS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM6298004e-42HM629800.1 Musa acuminata AAA Group bHLH transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008797597.11e-165transcription factor BIM2-like
TrEMBLA0A2H3YF491e-164A0A2H3YF49_PHODC; transcription factor BIM2-like
STRINGXP_008797597.11e-164(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76237128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-33BES1-interacting Myc-like protein 2