PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s916951g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 511aa    MW: 57239.2 Da    PI: 4.8344
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s916951g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.71.7e-30341761128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....... 77 
                        lp+G++F+P+d el+ e+L+ kv   +      ++++   ++e  +i++++P++Lp  +k++ ++++fF++++++ya+g+rk+r+       
  PDK_30s916951g001  34 LPAGVKFDPSDVELL-EHLAGKVGIGNskphvfIDEFIPtLEEDeGICYTHPENLP-GTKKDGSSVHFFHRTSNAYASGHRKRRKinsncdk 123
                        799************.99****987775666543332222444347**********.556778999******************85666655 PP

                NAM  78 .tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge..ktdWvmheyrl 128
                          +  +W++tgk+k+vl+ +g ++g kk++v+yk ++  g+  kt+Wvmh+y+l
  PDK_30s916951g001 124 sEECIRWHKTGKTKPVLE-NGVQKGWKKIMVLYKSSKGGGKpdKTNWVMHQYHL 176
                        433456************.999***********7665544333*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-3526195IPR003441NAC domain
PROSITE profilePS5100529.78734195IPR003441NAC domain
PfamPF023653.4E-1335176IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MEIKEKWTGL DRRGFVVGFL LDETGVVTLE WPGLPAGVKF DPSDVELLEH LAGKVGIGNS  60
KPHVFIDEFI PTLEEDEGIC YTHPENLPGT KKDGSSVHFF HRTSNAYASG HRKRRKINSN  120
CDKSEECIRW HKTGKTKPVL ENGVQKGWKK IMVLYKSSKG GGKPDKTNWV MHQYHLGTEE  180
DEMDGDLVVS KIFFQQQAKQ IDKSDTNPVN ESEIFAIRVS PRTPKSNTPQ PPRPKKDNLF  240
DTDEHNLQIL PVHIEQYAEV GVTRSPSPVV RLRDEGENPV PWAGESQAVE EPDPNNLDES  300
LLCHEVLDSF PRIEDSFGYP KLDRDRNEMP AAEANTLCGF SDLDNILIDT PPDFQLARND  360
KNPYHQECCT VTDEDGKAQL KGPLDPTIAC PAIATRLASL QMVGEISKGH VPFHIGRLRD  420
GDNEGEPLGF CRTNVVFLDD HWSNVPCNEI VRGGDLRPDI KVVVLGPIGA EHGRQQLKEL  480
GPEGDHFEVI YMEVNDVTTE NLDVDDNCSK F
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008775622.10.0SUPPRESSOR OF GAMMA RESPONSE 1-like
TrEMBLA0A2H3WYJ40.0A0A2H3WYJ4_PHODC; SUPPRESSOR OF GAMMA RESPONSE 1-like
STRINGXP_008775622.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14490.13e-74NAC domain containing protein 85