|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PDK_30s906271g001 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
Family |
ERF |
Protein Properties |
Length: 384aa MW: 42101.8 Da PI: 9.6421 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s906271g001 | genome | PDK | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.9 | 7.1e-20 | 183 | 231 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++GVr+++ +g+WvAeIr p++ r+r++lg+f+taeeAa a++ a+ l+g
PDK_30s906271g001 183 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAMAYDMAAYTLRG 231
8******9.**********955...5***********************9997 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 384 aa
Download sequence Send
to blast |
MEDRLPKVDR SELNAVMVMP PDSHHHHHFP SSPKNSILNF LDPKAECLTE SPPVELDGMA 60 NTSQVVPPPS CSSSSRNSSS SYPPMAPKPP PLTFFLQKEA PVEPSTLLSP RKIPLSSAHL 120 HINLQMHQKL QKPEGLQLHR LHHQGSINSL SSIALETPTK GRRGGSTTVS SHRQQQQPAA 180 KLFRGVRQRH WGKWVAEIRL PRNRTRVWLG TFDTAEEAAM AYDMAAYTLR GDLAHLNFPH 240 LKDQLRDAAS EKFSHPHAAT ASLLEAKLKA FRNSSSSSAF PSLASNQPKQ LPEKGSLRMC 300 LGGECIPPVK KQKKSGTDEE AASTSITSTW SNKKELPSDA GGRKAVQQEL ITSAGDADGV 360 LLSRMPSLDM DMIWDSLPIA AVDS
|