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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s889471g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | BES1 | ||||||||
Protein Properties | Length: 251aa MW: 26840.9 Da PI: 8.4994 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 200.7 | 4.5e-62 | 4 | 123 | 2 | 117 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl...eeaeaagssasasp 90 g+gr ptw+ErEnnkrRERrRRaiaaki++GLR Gnyklpk++DnneVlkALc eAGwvvedDGttyrkg+kpl ea+a+g+s+++sp PDK_30s889471g001 4 GGGRLPTWRERENNKRRERRRRAIAAKIFSGLRTLGNYKLPKHCDNNEVLKALCSEAGWVVEDDGTTYRKGCKPLpspPEAAAGGQSTNISP 95 89************************************************************************99777788999******* PP DUF822 91 esslq.sslkssalaspvesysaspkss 117 +ss++ +s+ ss+++spv+sy+asp+s+ PDK_30s889471g001 96 CSSSHhLSPPSSSFPSPVPSYHASPSSK 123 ****99******************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.7E-59 | 4 | 122 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MTSGGGRLPT WRERENNKRR ERRRRAIAAK IFSGLRTLGN YKLPKHCDNN EVLKALCSEA 60 GWVVEDDGTT YRKGCKPLPS PPEAAAGGQS TNISPCSSSH HLSPPSSSFP SPVPSYHASP 120 SSKPDWDYAA FRHPLFAASA PASPTRGRHH GHPATIPECD ESDASTVDSG RWVSFQMTAP 180 ASPTFNLVNP VAQMPETVVG PGGGGMSDRG RGGVEFEFGN GRVKPWVGER IHEVGVEDLE 240 LTLGVGSSGS K |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-26 | 7 | 79 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-26 | 7 | 79 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-26 | 7 | 79 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-26 | 7 | 79 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid biosynthetic genes. May act as transcriptional repressor by binding the brassinosteroid-response element (5'-CGTGCG-3') in the promoter of GRAS32 (AC Q9LWU9), another positive regulator of brassinosteroid signaling (By similarity). {ECO:0000250}. | |||||
UniProt | Positive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid (BR) biosynthetic genes (PubMed:17699623, PubMed:19220793). May act as transcriptional repressor by binding the brassinosteroid-response element (BREE) (5'-CGTG(T/C)G-3') in the promoter of DLT (AC Q9LWU9), another positive regulator of BR signaling (PubMed:19220793). Acts as transcriptional repressor of LIC, a negative regulator of BR signaling, by binding to the BRRE element of its promoter. BZR1 and LIC play opposite roles in BR signaling and regulation of leaf bending (PubMed:22570626). {ECO:0000269|PubMed:17699623, ECO:0000269|PubMed:19220793, ECO:0000269|PubMed:22570626}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Down-regulated by 24-epibrassinolide. {ECO:0000269|PubMed:22570626}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK106748 | 2e-65 | AK106748.1 Oryza sativa Japonica Group cDNA clone:002-115-C06, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008795632.1 | 1e-120 | protein BZR1 homolog 1 | ||||
Swissprot | B8B7S5 | 1e-85 | BZR1_ORYSI; Protein BZR1 homolog 1 | ||||
Swissprot | Q7XI96 | 1e-85 | BZR1_ORYSJ; Protein BZR1 homolog 1 | ||||
TrEMBL | A0A2H3Y9V8 | 1e-119 | A0A2H3Y9V8_PHODC; protein BZR1 homolog 1 | ||||
STRING | XP_008795632.1 | 1e-119 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5474 | 34 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75080.2 | 3e-35 | BES1 family protein |
Publications ? help Back to Top | |||
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