 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PDK_30s884401g002 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 263aa MW: 30127.2 Da PI: 7.5974 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s884401g002 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.7 | 1.1e-19 | 80 | 133 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ +q+++Le+ Fe +++++ +++++LA+ lgL+ rqV +WFqNrRa++k
PDK_30s884401g002 80 KKRRLSVDQVKTLEKTFEVENKLDPDRKARLAQDLGLQPRQVAIWFQNRRARWK 133
456899***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 127.1 | 7.7e-41 | 79 | 171 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrls +qvk+LE++Fe e+kL+p+rK++la++Lglqprqva+WFqnrRAR+k+kq+E dy+aL+++y++lk + ++L +++e+L++e+k
PDK_30s884401g002 79 EKKRRLSVDQVKTLEKTFEVENKLDPDRKARLAQDLGLQPRQVAIWFQNRRARWKSKQMEGDYAALRARYETLKIDCDALLHDKEKLAAEIK 170
69***************************************************************************************998 PP
HD-ZIP_I/II 93 e 93
+
PDK_30s884401g002 171 Q 171
7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MALVQWTSPM ATRHITPVFK KFKIKTEIKI HPVIILDLDR SSGPVQEKEK YEERFQSMMD 60
GVEWEDEELC SNGRSALGEK KRRLSVDQVK TLEKTFEVEN KLDPDRKARL AQDLGLQPRQ 120
VAIWFQNRRA RWKSKQMEGD YAALRARYET LKIDCDALLH DKEKLAAEIK QLKAKLANSA 180
TITRLENKDA EERPALIFRD GASDSDSSVY STNALFSPNG TSQELVPWKR ISQEHEKIYD 240
SVHSVAGLSC LNKHDETPSI IEG
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 104 | 110 | DRKARLA |
| 2 | 127 | 135 | RRARWKSKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
