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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PDK_30s884391g001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family |
ERF |
Protein Properties |
Length: 405aa MW: 44721.5 Da PI: 9.3012 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s884391g001 | genome | PDK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.6 | 8.3e-20 | 219 | 267 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++GVr+++ +g+WvAeIr p++ r+r++lg+f taeeAa a++ a+ kl+g
PDK_30s884391g001 219 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFNTAEEAAMAYDMAAYKLRG 267
8******9.**********955...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MQSASQKACR CASHCFYSED TTSAFKKGFG GGVLVHIVSE KRMEDQYPEV DYSESNAMMV 60 MALASHHHHH NQFLPSTTST PILNFLHPKS EHLMESPMEL NGMPAISQVV RPPSCSSSSS 120 GNSSSSSPTM ASKPPRSFTF FLQKEPMVQP SALLTSRNIP LSSADPNINL QMYQKLQEPG 180 MAEGLQLHHL GSISSLSYSG LETSTKGRQQ QQQQQAKLFR GVRQRHWGKW VAEIRLPRNR 240 TRVWLGTFNT AEEAAMAYDM AAYKLRGDLA HLNFPHLKHE LRDAVSGSSH PHHAATASLL 300 EAKLKASRKF SASSTSNQPK RHPEKDFLRM GVGERMPQVK KQKKTGTDEE AASTSIASTR 360 SRKELPSDLE DKKLGGDADG VLLSSMPSLD MDMIWDSLPT SASDS
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 1e-19 | 217 | 275 | 1 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |