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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PDK_30s873351g005 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family |
HD-ZIP |
Protein Properties |
Length: 200aa MW: 22500.1 Da PI: 4.8352 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s873351g005 | genome | PDK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 59.3 | 6.2e-19 | 11 | 64 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k
PDK_30s873351g005 11 KKRRLSVDQVRALEKNFELENKLEPERKVRLAQELGLQPRQVAVWFQNRRARWK 64
456899***********************************************9 PP
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2 | HD-ZIP_I/II | 132.5 | 1.5e-42 | 10 | 101 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrls +qv++LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy+aLk++ydal+++ ++L++++e+L e+k
PDK_30s873351g005 10 EKKRRLSVDQVRALEKNFELENKLEPERKVRLAQELGLQPRQVAVWFQNRRARWKTKQLERDYAALKASYDALRADFDALHRDKEALLVEIK 101
69*************************************************************************************98887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 200 aa
Download sequence Send
to blast |
MQGGGGGGGE KKRRLSVDQV RALEKNFELE NKLEPERKVR LAQELGLQPR QVAVWFQNRR 60 ARWKTKQLER DYAALKASYD ALRADFDALH RDKEALLVEI KVLKEKLGED ESLSLSSVKE 120 EPVVSESENK ASEEPPAPVC KDGSSDSDSS AVLNDGGFFF QHQLLKMEDG GFLGGEEPCS 180 SFFSDDHAAT LNWYYPEHWP
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor. {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151}. |