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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PDK_30s861241g006 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family |
ERF |
Protein Properties |
Length: 232aa MW: 26311.6 Da PI: 10.0552 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s861241g006 | genome | PDK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 37.5 | 6.1e-12 | 107 | 150 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
+ +GV++ k+ +W A I++ +k+++lg+ g+ eeAa+++++a+
PDK_30s861241g006 107 CVMRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 150
568***99..47*********4.....5********************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MVSIRRRRYL GLCTGKSSIP VELPKPAAIG NTVENSNQNV KPFSVHPMPS DNLSLQMPIN 60 VSEALPGSSN ASGSSSSKEE VNHYYPGKQI KRRKRHRRKH FEDQEPCVMR GVYFKNMKWQ 120 AAIKVDKKQI HLGTVGSQEE AARLYDRAAF MCGREPNFEL LEEEKQELRQ YKWEDFLAVT 180 RNAINNKKHQ KRLGADRRKK PESQLQSNDG EREKGTHASS ASDDGDADTS VS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 186 | 200 | KKHQKRLGADRRKKP |