PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s856231g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 502aa    MW: 56156.7 Da    PI: 4.5342
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s856231g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1661.3e-5161341129
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                        lppGfrFhPtd elv++yLk+kv+gk+++l e+i+e+++yk+ Pw+Lp k ++++++ ewyfF++rd+kya+g+r+nrat+ gyWk+tgkd+
  PDK_30s856231g001   6 LPPGFRFHPTDVELVCYYLKRKVTGKSFRL-EAISEIELYKFAPWELPdKsCLRSKDLEWYFFCPRDRKYANGSRTNRATEIGYWKTTGKDR 96 
                        79****************************.89**************96347777888********************************** PP

                NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                        ++++ ++++vg+kktL+f+ g+ap+g +tdWvm eyrle
  PDK_30s856231g001  97 AIIH-NSHTVGMKKTLIFHVGKAPRGDRTDWVMYEYRLE 134
                        ****.999*****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.15E-554138IPR003441NAC domain
PROSITE profilePS5100551.5736159IPR003441NAC domain
PfamPF023653.7E-277133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    Send to blast
MAKTLLPPGF RFHPTDVELV CYYLKRKVTG KSFRLEAISE IELYKFAPWE LPDKSCLRSK  60
DLEWYFFCPR DRKYANGSRT NRATEIGYWK TTGKDRAIIH NSHTVGMKKT LIFHVGKAPR  120
GDRTDWVMYE YRLEDKELVV AGYSQPLRIK SLLCLPVFCN NKKAFALPPD VVPSDSLSLA  180
KTHAETFVLE FEILVISLPA MGGLRDIQGL WNIAVVMARA RFQAIKRGSK SRWDGRTMGW  240
GTVVLASHSG MYVLCKIFQK SGPGPKIGEQ YGAPFNEEDW EDDAIVENAF LYPAPTPKPL  300
DDQPVLLEPI CQQSVASGVC EVSSTPDLPD ANGMLLEQLA EFLNDSPLHS ENAHDKISSS  360
AVLDKHINEV SGVETGIYDE LEDLSAEAVI NDNFNFSGTT NREYELQPML SELGSEQYVE  420
LDDFCFLQES DPSDFVMLDD LFEQYPLVEN PGSLNLNNMH DDTFSIGSVT TAVMNDPLSV  480
GTDMVGDEST LFLEALRPIS GG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-47613317142NO APICAL MERISTEM PROTEIN
1ut4_B3e-47613317142NO APICAL MERISTEM PROTEIN
1ut7_A3e-47613317142NO APICAL MERISTEM PROTEIN
1ut7_B3e-47613317142NO APICAL MERISTEM PROTEIN
3swm_A3e-47613320145NAC domain-containing protein 19
3swm_B3e-47613320145NAC domain-containing protein 19
3swm_C3e-47613320145NAC domain-containing protein 19
3swm_D3e-47613320145NAC domain-containing protein 19
3swp_A3e-47613320145NAC domain-containing protein 19
3swp_B3e-47613320145NAC domain-containing protein 19
3swp_C3e-47613320145NAC domain-containing protein 19
3swp_D3e-47613320145NAC domain-containing protein 19
3ulx_A3e-47213311140Stress-induced transcription factor NAC1
4dul_A3e-47613317142NAC domain-containing protein 19
4dul_B3e-47613317142NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008813045.11e-176NAC domain-containing protein 82-like
RefseqXP_017702290.11e-176NAC domain-containing protein 82-like
TrEMBLA0A2H3ZFJ41e-174A0A2H3ZFJ4_PHODC; NAC domain-containing protein 82-like
STRINGXP_008813044.11e-172(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47313664
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.12e-64NAC domain containing protein 103