 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PDK_30s839411g020 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
WRKY |
| Protein Properties |
Length: 253aa MW: 28525 Da PI: 6.8515 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s839411g020 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 93.6 | 1.5e-29 | 94 | 153 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK k+++ pr+Y+rC++a +C+vkkkv+rs +d++v++ tYegeHnh+
PDK_30s839411g020 94 VKDGYHWRKYGQKITKDNPSPRAYFRCSMApECHVKKKVQRSPDDKSVLVATYEGEHNHP 153
58***************************99****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MDLQRNVSDK EKMQEIGAEL ERLRAENKEL SLLLHSMNHK YTTLQAHVEK IREEMDCMNE 60
SSHDLIKTQP IESVKPNLTR RYFRTNEDSA SLIVKDGYHW RKYGQKITKD NPSPRAYFRC 120
SMAPECHVKK KVQRSPDDKS VLVATYEGEH NHPLPRELDG MTSQPNISST GLMVGFSSST 180
SRDQSQPEVT LGLALCGSNH EAVRSTETLI NETNNNNNIM EECITLLSGD PNFRVALAAA 240
VARSVLSNHP SNS
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 2ayd_A | 5e-20 | 93 | 155 | 13 | 74 | WRKY transcription factor 1 |
