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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PDK_30s829431g001 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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| Family |
LBD |
| Protein Properties |
Length: 202aa MW: 21951 Da PI: 6.132 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s829431g001 | genome | PDK | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 135.6 | 1.9e-42 | 41 | 140 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92
+CaaCk+lrr+C+++Cvlapyfp ++p kf +h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a
PDK_30s829431g001 41 PCAACKILRRRCVDKCVLAPYFPPTEPLKFTTAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQA 132
7******************************************************************************************* PP
DUF260 93 elallkee 100
+la++++
PDK_30s829431g001 133 QLARAQAD 140
***99875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 202 aa
Download sequence Send
to blast |
MEPSDTTTTF LHHHFSSSPS SSPTSSPPSF PPTSPPVVLS PCAACKILRR RCVDKCVLAP 60
YFPPTEPLKF TTAHRVFGAS NIIKFLQELP ESQRADAVSS MVYEANARIR DPVYGCAGAI 120
CQLQKQVSEL QAQLARAQAD LVTMQAQHAH LIALVCMEMA QSQQQCIPSQ PVDGLAAGPV 180
VDAFYLDADS SHGSIWEEPL WT
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