PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s816181g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 289aa    MW: 31775.5 Da    PI: 7.1502
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s816181g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.44e-25107166159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                        ldDgy+WrKYGqKe+++s+fpr+Y+rCt++   gC++ ++v+rs++d   ++itY geH+++
  PDK_30s816181g003 107 LDDGYTWRKYGQKEIQSSKFPRAYFRCTHKydqGCKAIRQVQRSEDD--EFIITYMGEHTCR 166
                        59***************************99999***********55..4789*******96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.1E-25100168IPR003657WRKY domain
SuperFamilySSF1182904.58E-23102168IPR003657WRKY domain
PROSITE profilePS5081120.621102168IPR003657WRKY domain
SMARTSM007743.8E-32107167IPR003657WRKY domain
PfamPF031061.2E-23108166IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MTSPSQGNPS TEAAIEELIK GREAATRLGV FLQEATLGKS AIEAFKEVLD SFSRSLSVLD  60
SGQPLKNPAI IGVGGRKKKI SPVGDKRGGC RRRSQPTPSR IVKSKTLDDG YTWRKYGQKE  120
IQSSKFPRAY FRCTHKYDQG CKAIRQVQRS EDDEFIITYM GEHTCREPAM LPHIISPSYL  180
EGSCLISFRS NPTDNRQEAP LPSSFPSYKQ ECHEEVLSNL SPGSSSSAYV TLSAAYEGSK  240
LMTPLGSTSD HGDVTSGFHS STSSLHYVGF GTDSFEDIFA FDQDGFLQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-27105166669OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008782668.10.0probable WRKY transcription factor 70
TrEMBLA0A2H3XEL50.0A0A2H3XEL5_PHODC; probable WRKY transcription factor 70
STRINGXP_008782668.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-35WRKY DNA-binding protein 70