|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PDK_30s815981g006 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
Family |
ERF |
Protein Properties |
Length: 341aa MW: 36750.7 Da PI: 5.7496 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s815981g006 | genome | PDK | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56 | 9.9e-18 | 43 | 91 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +gr++AeIrdp++ + r++lg+f+ta+eAa a+++a+++++g
PDK_30s815981g006 43 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 91
56******.**********965...5************************987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010102 | Biological Process | lateral root morphogenesis |
GO:0010432 | Biological Process | bract development |
GO:0010451 | Biological Process | floral meristem growth |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MGFCQAKTSH SPFSSSPSTS SPTPATSPTE RRGRRKPTEP GRFLGVRRRP WGRYAAEIRD 60 PTTKERHWLG TFDTAQEAAL AYDRAALSMK GTQARTNFIY TDTPISTFHS LLTPFHSQSF 120 IPPPMPPPPT QPHHLLVPTS MQTTNQSIPS ECPMSHHFAF QSGGNTSTMP TSNSSMETDI 180 ANDFLFSDDS RSGYLSSIIP ESCLRSSPKH SSPSQDISSS CELNAQILSP PSQVQSHGSN 240 SASSSYSATN GALFDAYSGG MGAMTSVDFP CLTEMNSGFW LDEPLWELSA CEFPATTISS 300 MGDLSSSLMQ APVCGSLPQV SDSSPPASSL TDVFEVGYSL F
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the control of cell division patterns during the early lateral root primordium development. Acts downstream of auxin signaling (PubMed:17630277). Regulated by ARF7 and ARF19 in response to auxin. Co-acts with LBD16 and LBD18 to control lateral root development (PubMed:23749813). Involved in the determination of floral meristem identity and suppression of bract growth. Required for proper conversion of secondary inflorescences to flowers. Acts together with NPR5/BOP2 and NPR6/BOP1 to promote expression of LFY and AP1, two central regulators of floral meristem identity (PubMed:19482972). {ECO:0000250|UniProtKB:Q9LND1, ECO:0000269|PubMed:17630277, ECO:0000269|PubMed:19482972, ECO:0000269|PubMed:23749813}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By auxin. {ECO:0000269|PubMed:17630277, ECO:0000269|PubMed:23749813}. |