PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s780842g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family G2-like
Protein Properties Length: 320aa    MW: 35901.9 Da    PI: 5.4138
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s780842g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like40.46.3e-1399148253
            G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                        +rl+W  eLH+rF+ a    G  e+A P+++ elm+v+gLtl++v   LQ Y
  PDK_30s780842g001  99 ARLEWDFELHQRFLLATVLVG--ERAPPSRVYELMGVEGLTLSQVSNRLQNY 148
                        79**************99883..89*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.9E-1296148IPR009057Homeodomain-like
SuperFamilySSF466895.02E-696149IPR009057Homeodomain-like
TIGRFAMsTIGR015573.1E-1099149IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MCAYDDDKIR HESLHHGACL HLTKPITITD FGVVSQKAWF QREHKEQRSE SVGSQPNIEE  60
VGQAGASCSL KTPKGGSSGK NEFIRKRQEG GGSEKPKQAR LEWDFELHQR FLLATVLVGE  120
RAPPSRVYEL MGVEGLTLSQ VSNRLQNYLN YCIMPSKNGK KKSYLLRVYK DISYLSCLQQ  180
TMMANDPSRN QLPHYSHHAE PEWTSSASTT PRQCDVEPPR RNFTQEQPFH AANELAVPEA  240
SLDVQLHESS LVDKNTADDM AAIENFPSTA EPRSARDMAD ASSPAGDDID DIFDVRNYVF  300
DDASIAKMLD DITRENDTTP
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.15e-11response regulator 18