 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PDK_30s776121g001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
NAC |
| Protein Properties |
Length: 255aa MW: 29112.7 Da PI: 7.2201 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s776121g001 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 108.3 | 9e-34 | 12 | 158 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....................kvka....eekewyfFskrdkkyat 70
p +F+P +elv +yL++++ +++l++ ++ike++iy+++P+d+ + + k++yfF+ r+ ky++
PDK_30s776121g001 12 PSHHFRPFPKELVEFYLRPRLLNQPLPC-QAIKELNIYDFHPRDILGgrekceeiregqikvilegaQ--NgntpAGKHLYFFTLRKMKYPN 100
6679************************.89**************63467899999998888777541..2333455689************ PP
NAM 71 gkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
g+r+ r t+ gyWka+ kd+ + +k+ +++g+kk Lvf++g++ +g++t+W+m+ey++
PDK_30s776121g001 101 GTRPARGTNGGYWKASEKDQIIRDKDAKEIGCKKFLVFHEGHQGNGTRTRWLMQEYTV 158
********************************************************87 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MEEDEGIGNV APSHHFRPFP KELVEFYLRP RLLNQPLPCQ AIKELNIYDF HPRDILGGRE 60
KCEEIREGQI KVILEGAQNG NTPAGKHLYF FTLRKMKYPN GTRPARGTNG GYWKASEKDQ 120
IIRDKDAKEI GCKKFLVFHE GHQGNGTRTR WLMQEYTVKE FWFSTDQNKD ELGALALCEI 180
YLKPTRNQSR DGELQVDEQE VEEEGSPSHS SDNIFADRRV GPRPPPWNNG KDAPVASTSG 240
CPSAFGPIYS HNVRR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3ulx_A | 2e-20 | 9 | 158 | 14 | 140 | Stress-induced transcription factor NAC1 |
