PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s771211g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 559aa    MW: 61637.8 Da    PI: 7.3304
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s771211g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1023.5e-32100157260
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                        +DgynWrKYGqK+vkgse+prsYY+Ct+++C++kk++ers+ d++++eitY+g+H+h+k
  PDK_30s771211g003 100 EDGYNWRKYGQKHVKGSEYPRSYYKCTHPNCQMKKQLERSH-DGQITEITYKGRHDHPK 157
                        8****************************************.***************85 PP
2WRKY38.81.9e-12275298124
                        ---SS-EEEEEEE--TT-SS-EEE CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsY 24 
                        ldDgy+WrKYGqK+vkg+++prs+
  PDK_30s771211g003 275 LDDGYRWRKYGQKVVKGNPNPRSF 298
                        59********************97 PP
3WRKY60.43.5e-193684072059
                        S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY  20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  PDK_30s771211g003 368 PPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 407
                        69*************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-2891158IPR003657WRKY domain
PROSITE profilePS5081124.37594158IPR003657WRKY domain
SuperFamilySSF1182901.83E-2594158IPR003657WRKY domain
SMARTSM007742.5E-3599157IPR003657WRKY domain
PfamPF031064.4E-24100156IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.0E-33260295IPR003657WRKY domain
SuperFamilySSF1182902.22E-10267298IPR003657WRKY domain
PROSITE profilePS5081130.102270409IPR003657WRKY domain
SMARTSM007742.7E-31275408IPR003657WRKY domain
PfamPF031069.5E-8276298IPR003657WRKY domain
SuperFamilySSF1182904.45E-15368409IPR003657WRKY domain
PfamPF031065.7E-14368407IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.0E-33370409IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    Send to blast
ASVNPSQPEQ EPSLQVQSQS QTQTSSQLAK AEKAAPSSHE LTLSVRNPHP PLETLPLAVV  60
PPEVASDELR QINGSENGIQ SLQSDHNGYM PSTITEKSLE DGYNWRKYGQ KHVKGSEYPR  120
SYYKCTHPNC QMKKQLERSH DGQITEITYK GRHDHPKPQP SRRIAVGVIL SAQGEEKPDG  180
LPSVASPEGK SSTAHLSHPI DPNGAPQLSP ISASDDDVEI GGAHSHYTGD EVIDGDDPES  240
KRRKMDATCV DATPIGKPNR EPRVVVQTVS EVDILDDGYR WRKYGQKVVK GNPNPRSFVD  300
KLLQVYTRCI AFWRKFKQVL VSNRYGMVCP IPSGSGRIYR SRLIVTKVDE IYEPPRLVVT  360
KVDEIYEPPR SYYKCTNAGC PVRKHVERAS HDPKAVITTY EGKHNHDVPA AKTVNHDTSV  420
PMIADCSNTT TTRTSAALRG FMRTCDTMII SQKYTQPEES DTISLDLGVG ISRNHSNTTE  480
LHQSPARDQI HSHQIQSVGS DCGNVVIQAN PLSTLYGNSS NGIYGTSEDK GEGFMFRTAP  540
IDRSSNLYYA SAGSLVMGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-18994091474WRKY transcription factor 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008800638.10.0WRKY transcription factor SUSIBA2-like isoform X1
RefseqXP_026663441.10.0WRKY transcription factor SUSIBA2-like isoform X3
TrEMBLA0A2H3YMB20.0A0A2H3YMB2_PHODC; WRKY transcription factor SUSIBA2-like isoform X1
TrEMBLA0A3Q0I8W20.0A0A3Q0I8W2_PHODC; WRKY transcription factor SUSIBA2-like isoform X3
STRINGXP_008800638.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67403851
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.15e-82WRKY family protein