PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s758201g002

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

bHLH

Protein Properties

Length: 277aa MW: 30774.2 Da PI: 6.5109

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s758201g002	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.2	0.00034	67	100	18	54
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++f eL ++l + + +K++Ka+iL Av+ + +L PDK_30s758201g002 67 KRFLELGSILEPG---KPPKMDKAAILSDAVRMVTQL 100 6899999999998...89**************99988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	7.41E-7	66	122	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	3.2E-8	67	122	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence Send to blast
MGSPENTNWV FDCPLIDDMS VASGDFPAPG TGFYWNSQGI NSSSNSSVEI SGSFVDSAGI 60 KESDSKKRFL ELGSILEPGK PPKMDKAAIL SDAVRMVTQL RSEAQKLKDS NEDLQEKIKE 120 LKWNCQQKVN VHYEDCNNSE RHPKRLTGSM VLKGYGWLIY CYLIASMLSC GIIVFGRFIK 180 KSPYPCFVAE KNELRDEKQR LKAEKENLEQ QIKILNARAS YVAHPPVIPA AFAAQGQTAA 240 HKLMMPVIGY PGFPMWQFMP PADVDTSQDA ESCPPVA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008800495.1	1e-74	transcription factor ILR3-like
TrEMBL	A0A3L6E2S6	8e-74	A0A3L6E2S6_MAIZE; Transcription factor ILR3
STRING	XP_008800495.1	4e-74	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2023	38	85

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	3e-27	bHLH family protein