PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s755021g005

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

FAR1

Protein Properties

Length: 376aa MW: 40626.7 Da PI: 9.3255

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s755021g005	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.1	1.6e-09	88	121	58	91
FAR1 58 trtgCkaklkvkkekdgkwevtkleleHnHelap 91 Cka+++v ++++g w v+kl+ eHnHel p PDK_30s755021g005 88 VGDRCKAMMEVVRKEHGMWTVSKLVVEHNHELLP 121 5568***************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.9E-7	88	121	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence Send to blast
MVLISEIAGG NPNEEEEGRK EEEGPAEEEL KVDGEKGSPE KPHEPAGSGG AAGEVKESPV 60 KGPQGSSAGQ THYNEYALRG PPAREAAVGD RCKAMMEVVR KEHGMWTVSK LVVEHNHELL 120 PNKDADGDGV GLVPAVGMEF DSVEVAKAFY YGYGEKSGFK ARTGSNRRSA GSGHLIMQRF 180 LCWRGNYLMY KKNSDAGAGK VKRGPYKKRA RRLAEEPAAA AAARKDGDVV EVIQVESSTE 240 KGGVAGDDHG VEVQSGPPLK EQAVVEKDAG QKPPAPAAAA AARKDDGKAI PVANTAQSRL 300 LRELGVRASR YTQEERRDII LKYTMKKTNR QVVESPVKVP SRQALAERRQ RGIGGRFLSR 360 HESPVFALHL TFNTNI

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence Send to blast

MVLISEIAGG NPNEEEEGRK EEEGPAEEEL KVDGEKGSPE KPHEPAGSGG AAGEVKESPV  60
KGPQGSSAGQ THYNEYALRG PPAREAAVGD RCKAMMEVVR KEHGMWTVSK LVVEHNHELL  120
PNKDADGDGV GLVPAVGMEF DSVEVAKAFY YGYGEKSGFK ARTGSNRRSA GSGHLIMQRF  180
LCWRGNYLMY KKNSDAGAGK VKRGPYKKRA RRLAEEPAAA AAARKDGDVV EVIQVESSTE  240
KGGVAGDDHG VEVQSGPPLK EQAVVEKDAG QKPPAPAAAA AARKDDGKAI PVANTAQSRL  300
LRELGVRASR YTQEERRDII LKYTMKKTNR QVVESPVKVP SRQALAERRQ RGIGGRFLSR  360
HESPVFALHL TFNTNI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010942431.1	0.0	protein FAR1-RELATED SEQUENCE 4 isoform X2
Refseq	XP_010942448.1	0.0	protein FAR1-RELATED SEQUENCE 4 isoform X2
Refseq	XP_029116593.1	0.0	protein FAR1-RELATED SEQUENCE 4 isoform X1
Refseq	XP_029116595.1	0.0	protein FAR1-RELATED SEQUENCE 4 isoform X1
Refseq	XP_029116597.1	0.0	protein FAR1-RELATED SEQUENCE 4 isoform X1
Refseq	XP_029116598.1	0.0	protein FAR1-RELATED SEQUENCE 4 isoform X1
TrEMBL	A0A3Q0I2M5	1e-162	A0A3Q0I2M5_PHODC; uncharacterized protein LOC113462603 isoform X2
STRING	XP_008787331.1	1e-156	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14833	13	18

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	3e-10	FAR1-related sequence 12