PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s751961g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 326aa    MW: 36488.1 Da    PI: 5.3098
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s751961g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-13117168155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +r+ h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++Y+k+L+
  PDK_30s751961g001 117 QRMIHIAVERNRRKQMNEYLAVLRSLMPSS---YVQRGDQASIIGGAINYVKELE 168
                        6999**************************...9******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.104.2E-14115172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.43E-14115172No hitNo description
SuperFamilySSF474592.09E-17116182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.555116167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-10117168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-11122173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MEKEAVVFPQ DLFGYTCREW YNMGGGAWGY DFGRVGEEEE KKREVLECEL GGKVGGSWDP  60
PASSLVQNLE EWDANSSFPE ACEGMALEGE AMGDAAAGRR KRRRAKSVKN KEEVESQRMI  120
HIAVERNRRK QMNEYLAVLR SLMPSSYVQR GDQASIIGGA INYVKELEQL LQSLEVQKRL  180
RQRSDATGLA HPFANFFAFP QYSSCSSGGS SNSSSTAHTS SNHSIANEMA AENRPAMADI  240
EVTMVESYAN LKVFSRRWPK QLLKMVMGLQ NMRLTTLHLN ATTVDQLVLY SFSLKVEDDC  300
QFTSVDDIAT AVYQMLGRIQ EEANFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199103RKRRR
2117128RMIHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008804795.10.0transcription factor bHLH94-like
TrEMBLA0A2H3YWD40.0A0A2H3YWD4_PHODC; transcription factor bHLH94-like
STRINGXP_008804795.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74138156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.16e-69bHLH family protein