PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s736821g004 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | ERF | ||||||||
Protein Properties | Length: 180aa MW: 20038.7 Da PI: 9.528 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 43 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr ++ +g+Wv+eIr p + +r++lg++ t+e Aa+a++aa ++l+g PDK_30s736821g004 43 QYKGVRMRS-WGSWVSEIRAP-----HqkTRIWLGSYSTPEAAARAYDAALLCLKG 92 6*****998.**********7.....335************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 6.5E-30 | 42 | 101 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 9.2E-11 | 43 | 92 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.9E-34 | 43 | 106 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-20 | 43 | 102 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 21.759 | 43 | 100 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.69E-20 | 43 | 102 | No hit | No description |
PRINTS | PR00367 | 1.1E-8 | 44 | 55 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-8 | 66 | 82 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0034605 | Biological Process | cellular response to heat | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071497 | Biological Process | cellular response to freezing | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MVKRSSSSSS SRVLDTSNSS IPPPNHTTTT KLRPKDEGIR KRQYKGVRMR SWGSWVSEIR 60 APHQKTRIWL GSYSTPEAAA RAYDAALLCL KGSSAALNFP TSLPYHPAPN TVMSPKSIQR 120 VAAPPRTPSN SCMASTIEDK SWIDFGAFQS PKLMDQMISP LISSWEELDE EGDFELWSFC |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00156 | DAP | Transfer from AT1G21910 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008802060.1 | 1e-106 | ethylene-responsive transcription factor ERF014-like | ||||
TrEMBL | A0A2H3YPZ5 | 1e-105 | A0A2H3YPZ5_PHODC; ethylene-responsive transcription factor ERF014-like | ||||
STRING | XP_008802060.1 | 1e-105 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3197 | 34 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-32 | ERF family protein |