 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PDK_30s732841g001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
NAC |
| Protein Properties |
Length: 318aa MW: 37052.7 Da PI: 6.3424 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s732841g001 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 58.8 | 1.9e-18 | 7 | 53 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
+ppGfrFhPtdeelv++yL+kk+++kk++l +vik+vd+y++ePwdL+
PDK_30s732841g001 7 VPPGFRFHPTDEELVNYYLRKKMASKKIDL-DVIKDVDLYRIEPWDLQ 53
69****************************.9***************7 PP
|
| 2 | NAM | 54.2 | 4.8e-17 | 53 | 97 | 84 | 129 |
NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+atg+dk+++s k++l+g++ktLvfy+grap+g+k+dW+mheyrle
PDK_30s732841g001 53 QATGRDKPIYS-KHNLIGMRKTLVFYQGRAPNGQKSDWIMHEYRLE 97
58*********.899*****************************85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MDTFSHVPPG FRFHPTDEEL VNYYLRKKMA SKKIDLDVIK DVDLYRIEPW DLQATGRDKP 60
IYSKHNLIGM RKTLVFYQGR APNGQKSDWI MHEYRLETNE NAPPQEEGWV VCRVFKKRMP 120
TVRRASELES PCWYDDQVSI MQDQLDFPNR IAIQPNMTYH QHLQSYKGET KMHYHLPHEP 180
FHQLPQLESP KLPNYINHGS SFHCFTTSED KTVQPSHQLQ MITFYKCFTT SEDKTVQPSH 240
QLQMITFYNS GGDIDQAVEQ VTDWRVLDKF VASQLSHDVS KGPEYSDAAE ILQVSDKQEV 300
AVEYASTSTS SCQIDLLK
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:16103214, PubMed:25148240). {ECO:0000250|UniProtKB:Q9LVA1, ECO:0000269|PubMed:16103214, ECO:0000269|PubMed:25148240}. |
