 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PDK_30s728681g004 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
bHLH |
| Protein Properties |
Length: 290aa MW: 32103.1 Da PI: 9.379 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s728681g004 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 24.6 | 4.7e-08 | 138 | 178 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r RR+ri +++ L++l+P ++++ a++L +A++Y+k L
PDK_30s728681g004 138 ARHRRERISERIRILQRLVPGG-----TRMDTASMLDEAIRYMKFL 178
699*****************87.....8****************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MDLDFIDSPP DVQMDLMAMM MEMEKLADFS KPPQPLAEFA SGPPAAFCNA PNNNTPPSSL 60
LVGAPSSVPC SNPIIMASNT LAAGTSPSEL SKRASAEAVR EMMFRIAAMQ PIHIDPESVK 120
PPKRRNVKIS KDPQSVAARH RRERISERIR ILQRLVPGGT RMDTASMLDE AIRYMKFLKD 180
QVSRVGATSA STRDHCIKLP SPIPIPISKA IAKRPLTWYQ PSRVQDSRGD FHVIGCMAFP 240
RERLTCGWTQ RCEHEGEGDV GGFRARHVKI IRGVDELDSR GNNKMEPVMS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Required for the female reproductive tract development and fertility. {ECO:0000269|PubMed:17855426}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Negatively regulated by ARF3/ETT in the abaxial gynoecium. {ECO:0000269|PubMed:17855426}. |
| Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Vercruyssen L, et al.
ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development.
Plant Cell, 2014. 26(1): p. 210-29
[PMID:24443518] - Sparks EE,Benfey PN
HEC of a job regulating stem cells.
Dev. Cell, 2014. 28(4): p. 349-50
[PMID:24576420] - Zhu L, et al.
A Negative Feedback Loop between PHYTOCHROME INTERACTING FACTORs and HECATE Proteins Fine-Tunes Photomorphogenesis in Arabidopsis.
Plant Cell, 2016. 28(4): p. 855-74
[PMID:27073231] - Lozano-Sotomayor P, et al.
Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
Plant J., 2016. 88(3): p. 437-451
[PMID:27402171] - Boex-Fontvieille E, et al.
An Ethylene-Protected Achilles' Heel of Etiolated Seedlings for Arthropod Deterrence.
Front Plant Sci, 2016. 7: p. 1246
[PMID:27625656] - Gaillochet C, et al.
Control of plant cell fate transitions by transcriptional and hormonal signals.
Elife, 2018.
[PMID:29058667]
|
