PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Orthologous Group |

Publication

Basic Information? help Back to Top

TF ID

PDK_30s723941g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

G2-like

Protein Properties

Length: 191aa MW: 21388.2 Da PI: 5.1959

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s723941g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	46.1	1.1e-14	157	189	22	54
G2-like 22 GGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 GG AtPk+i+e+mkv+gLt+++vkSHLQ R PDK_30s723941g001 157 GGGVAATPKQIREMMKVDGLTNDEVKSHLQDCR 189 77888*************************988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR01557	4.0E-11	158	189	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	9.5E-11	158	190	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence Send to blast
MDFAERARKC QEYVEALEEE RRKIEVFQRE LPLCLQLVTQ AIESIRMQIW SSEETVTDGP 60 VLEEFIPLKP TSSSTEEEKG GFMEMEQERS EKKPDWLRSV QLWNQETDHS LPKGDPPKRP 120 IAVNAKKIGG AFHPFERGKH APAAPAASSS TVGGGGGGGV AATPKQIREM MKVDGLTNDE 180 VKSHLQDCRI W

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008782297.1	1e-110	transcription factor NIGT1
Swissprot	Q9FPE8	2e-48	HHO3_ARATH; Transcription factor HHO3
TrEMBL	A0A2H3XDY4	1e-109	A0A2H3XDY4_PHODC; transcription factor NIGT1
STRING	XP_008782297.1	1e-109	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6470	37	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	2e-36	G2-like family protein

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]