 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PDK_30s722381g001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
GRAS |
| Protein Properties |
Length: 410aa MW: 46102.3 Da PI: 6.9047 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s722381g001 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 392.9 | 3.4e-120 | 39 | 409 | 3 | 373 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
+lL++cAe ++ d ++a+++L+ ls+++sp+gd++ Rl++ f++ L+ r+ r l + ++ps s +n+++ +++ +++v+P+l+f+
PDK_30s722381g001 39 RLLISCAELIHRADYSAARRILSLLSNISSPHGDSTDRLVHQFARSLSLRIDR----LTHLISPSLFS-DNEDTLQSSYLSLNKVTPFLRFA 125
69***************************************************....77778888887.566677788888*********** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl... 181
hltaNqaIlea++g++ +Hi+Dfd s+G+QWp++lqa+a+R+ ++ ps+RiTg g + l++tgerL+ fA++lg++f+f++l
PDK_30s722381g001 126 HLTANQAILEAIDGHRSIHILDFDTSHGVQWPPFLQAIAERSdpSSLPSIRITGTGT----GLDVLRRTGERLQAFANSLGLRFQFHPLylp 213
*****************************************9767789*********....9***************************666 PP
GRAS 182 vak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
+a+ + ++ ++++++pgE+laVn++l lh+ll++ s + + ++L++vk ++P vv+v+e+ea+hns+ Fl+rf+eal++y+a+f+s
PDK_30s722381g001 214 TADpDASASLNSSFQLHPGETLAVNCMLFLHKLLKDGSSDDPacKLVAFLHAVKAMNPVVVTVAEREANHNSPIFLRRFMEALDHYTAVFES 305
455344444456789999****************77666665778899******************************************** PP
GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlg 361
lea+lp++s er vE+++lgrei+++v eg+ r+erhe++e W+ ++ GF+++pls +a +qaklllr ++ s+gy++ +++sl+lg
PDK_30s722381g001 306 LEATLPPKSPERLEVEQVWLGREIEDIVGREGEGRKERHERFEWWEGLMRGRGFSSLPLSPFALSQAKLLLRLHYpSEGYQLPMSKNSLFLG 397
******************************************************************************************** PP
GRAS 362 WkdrpLvsvSaW 373
W+++pL+svS+W
PDK_30s722381g001 398 WQHKPLFSVSSW 409
************ PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MLTSLHSHTD EEEEGAHHRH PNLQILPHGL TAPSTHSCRL LISCAELIHR ADYSAARRIL 60
SLLSNISSPH GDSTDRLVHQ FARSLSLRID RLTHLISPSL FSDNEDTLQS SYLSLNKVTP 120
FLRFAHLTAN QAILEAIDGH RSIHILDFDT SHGVQWPPFL QAIAERSDPS SLPSIRITGT 180
GTGLDVLRRT GERLQAFANS LGLRFQFHPL YLPTADPDAS ASLNSSFQLH PGETLAVNCM 240
LFLHKLLKDG SSDDPACKLV AFLHAVKAMN PVVVTVAERE ANHNSPIFLR RFMEALDHYT 300
AVFESLEATL PPKSPERLEV EQVWLGREIE DIVGREGEGR KERHERFEWW EGLMRGRGFS 360
SLPLSPFALS QAKLLLRLHY PSEGYQLPMS KNSLFLGWQH KPLFSVSSWH
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor required for axillary (lateral) shoot meristem formation during vegetative development. Seems to act upstream of REVOLUTA. {ECO:0000269|PubMed:12730136}. |
