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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PDK_30s709471g005 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
MYB |
| Protein Properties |
Length: 291aa MW: 32868 Da PI: 6.048 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s709471g005 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 49.8 | 7.9e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l++++ G +W+++++ g+ R++k+c++rw +yl
PDK_30s709471g005 14 KGPWTAEEDKKLINCILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
79******************************99************97 PP
|
| 2 | Myb_DNA-binding | 48.1 | 2.6e-15 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++ E++l ++++ +lG++ W++Ia++++ gRt++++k+ w+++
PDK_30s709471g005 70 LSESEEKLVIELHSRLGNR-WSKIASHLP-GRTDNEIKNQWNTH 111
5899***************.*********.************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MGRQPCCDKV GLKKGPWTAE EDKKLINCIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60
LRPDLKRGLL SESEEKLVIE LHSRLGNRWS KIASHLPGRT DNEIKNQWNT HIKKKLRKMG 120
IDPISHKPIS STDEHHQKEE QQQEQPGAAA GEDGRSESIS LQCPQGQEEE KSITSSFDFI 180
ETDHPFLQDS PSFCTDEVPM IQPHEIILSG ASTTISFPST CTPSSGYSSS SSLKAEEIQF 240
PCMERPELTY LCGMDDFSQI WDSICSDGDG TLALDPLNHY QRKAWDRESW N
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that acts as positive regulator of abscisic acid (ABA) signaling in response to salt stress. Acts as negative regulator ABI1, ABI2 and PP2CA, which are protein phosphatases 2C acting as negative regulator of ABA signaling. Binds to the DNA specific sequence and core element 5'-ACGT-3' found in the promoters of ABI1 and PP2CA to negatively regulate their expression during ABA-dependent salt stress response. {ECO:0000269|PubMed:23660402}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress, drought stress and abscisic acid (ABA). Down-regulated by salicylic acid (SA) methyl jasmonate (JA). {ECO:0000269|PubMed:23660402}. |
