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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PDK_30s699491g008 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family |
ERF |
Protein Properties |
Length: 322aa MW: 35171.2 Da PI: 5.8931 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s699491g008 | genome | PDK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.5 | 7.9e-19 | 62 | 112 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr++ +g+WvAeIr p ng r +lg+f ta eAa a+++a+++++g
PDK_30s699491g008 62 CNYRGVRQRT-WGKWVAEIRKP--NG-GSRLWLGTFNTALEAALAYDEAARAMYG 112
56*****999.**********8..33.5************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
TKRVRNLHGG THPVAEAVAK WRKLKWQPDC SNDGEKYIQR VPAKGSRKGC MRGKGGPENS 60 HCNYRGVRQR TWGKWVAEIR KPNGGSRLWL GTFNTALEAA LAYDEAARAM YGPRARLNLP 120 ECGTAAKDTT LAASECYESA PTTSQHSGVS GVEESEVKAP KLEAGAETRS ANPPESAVEA 180 VACMVKAEAD EELFNHLDRL QDLHQDMFGI GEMMGNADAD PSNSTSTPQS RKSQKDQLGG 240 VDVITDWHFG ETPSALSFQI QSPDVKRLGT WCHVEQCPAD MDYGYGFAGP RRQDLEIGVA 300 GDQGMPELEF PDLSLLPESP RL
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
2gcc_A | 1e-16 | 63 | 120 | 5 | 63 | ATERF1 |
3gcc_A | 1e-16 | 63 | 120 | 5 | 63 | ATERF1 |