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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PDK_30s696511g002 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family |
ERF |
Protein Properties |
Length: 199aa MW: 21678.3 Da PI: 6.1572 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s696511g002 | genome | PDK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.5 | 7.1e-18 | 59 | 111 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
+ y+GVr++++ g+Wv+e+r+p + r +lg+f t+e+Aa+a++ a+ +l+ge
PDK_30s696511g002 59 PVYRGVRRRSNGGKWVCEVREP-----HskSRLWLGSFATPEMAARAHDVAAIALHGE 111
68****************9996.....335**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 199 aa
Download sequence Send
to blast |
MDLEDDSSVS SSSNDLSPRH PDVPIPPPYS PTSTPAPSPS STMLKRRAGR KKFKETRHPV 60 YRGVRRRSNG GKWVCEVREP HSKSRLWLGS FATPEMAARA HDVAAIALHG ESAKLNFPDS 120 THALPRASTT SPDDIRCAAK EEKAADAASE VFVDEEALFN MPGLVDSMAE GLLLTPPAMQ 180 KGFDWDGAEC HVDLSLWGD
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}. |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. {ECO:0000269|PubMed:17136305}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By calcium ion, methyl-jasmonate (MeJA), cold, drought, and high salinity stress. {ECO:0000269|PubMed:17136305}. |