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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
PDK_30s695601g004 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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| Family |
NAC |
| Protein Properties |
Length: 286aa MW: 32271.9 Da PI: 5.3559 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s695601g004 | genome | PDK | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 167.8 | 3.7e-52 | 10 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrF P+deelv++yL kkv++++++ ++ evd+++ ePw+Lp+ +k + +ewyfFs rd+kyatg+r+nratksgyWkatgkd++v
PDK_30s695601g004 10 LPPGFRFYPSDEELVCHYLYKKVANERVSG-GTMVEVDLHTREPWELPEVAKLSANEWYFFSFRDRKYATGSRSNRATKSGYWKATGKDRTV 100
79*************************999.88***************88888999************************************ PP
NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
++ ++++vg++ktLvfy+grap+g kt+Wvmhe+rle
PDK_30s695601g004 101 YDPtTHAVVGMRKTLVFYRGRAPNGMKTSWVMHEFRLE 138
**967778***************************985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MGLRDIESTL PPGFRFYPSD EELVCHYLYK KVANERVSGG TMVEVDLHTR EPWELPEVAK 60
LSANEWYFFS FRDRKYATGS RSNRATKSGY WKATGKDRTV YDPTTHAVVG MRKTLVFYRG 120
RAPNGMKTSW VMHEFRLENP HTPPKEDWVL CRVFHKKQGD SVNCSLGNDQ QNNIGWSSSH 180
LESSPLNDHA MPDGCNEQMG SSFPTVPYQE GNSSNTFLNL AVLHYNFLGF PQEVDSTTMM 240
GMDSGGGDDD FGLMLDVGMD DHDLVEGETA NTGSMKFQGG KDQLFF
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for axillary meristem initiation and separation of the meristem from the main stem. May act as an inhibitor of cell division. {ECO:0000269|PubMed:12837947, ECO:0000269|PubMed:17122068}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By BRM, at the chromatin level, and conferring a very specific spatial expression pattern. {ECO:0000269|PubMed:16854978}. |
| Publications
? help Back to Top |
- Chen C, et al.
Transcriptome profiling reveals roles of meristem regulators and polarity genes during fruit trichome development in cucumber (Cucumis sativus L.).
J. Exp. Bot., 2014. 65(17): p. 4943-58
[PMID:24962999] - Gonçalves B, et al.
A conserved role for CUP-SHAPED COTYLEDON genes during ovule development.
Plant J., 2015. 83(4): p. 732-42
[PMID:26119568] - Balkunde R,Kitagawa M,Xu XM,Wang J,Jackson D
SHOOT MERISTEMLESS trafficking controls axillary meristem formation, meristem size and organ boundaries in Arabidopsis.
Plant J., 2017. 90(3): p. 435-446
[PMID:28161901] - Espinosa-Ruiz A, et al.
TOPLESS mediates brassinosteroid control of shoot boundaries and root meristem development in Arabidopsis thaliana.
Development, 2017. 144(9): p. 1619-1628
[PMID:28320734] - Koyama T,Sato F,Ohme-Takagi M
Roles of miR319 and TCP Transcription Factors in Leaf Development.
Plant Physiol., 2017. 175(2): p. 874-885
[PMID:28842549]
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