PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s694572g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

BES1

Protein Properties

Length: 315aa MW: 33664.6 Da PI: 7.8605

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s694572g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	195.8	1.5e-60	2	120	1	117
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasasp 90 ++++r ptwkErEnnkrRERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+++++g+s s sp PDK_30s694572g001 2 TSGTRLPTWKERENNKRRERRRRAIAAKIYTGLRMYGNYKLPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGYKPPpaERMDVVGCSVSPSP 93 5899*********************************************************************999********** PP DUF822 91 esslqsslkssalaspvesysaspkss 117 ++s++ s+ ss+++sp++s+ + +++ PDK_30s694572g001 94 CASYNPSPASSSFPSPASSSYITNANN 120 **************99877666554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.1E-57	3	120	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI YTGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WIVEPDGTTY RKGYKPPPAE RMDVVGCSVS PSPCASYNPS PASSSFPSPA SSSYITNANN 120 AVNVADGNFP QHHLYMHGGS ISAPVTPPLS SPTARTPRIK TDWDDSAAQP PWASASYMFI 180 PNSTPPSPGR QVIPDPAWLA GIHLPTGGPS SPTFSLVSSN PFGFFKEVIA GGGSSRMMTP 240 GQSGTCSPVM PGGAGHVDVQ MSDGMSDEFA FGSSSNGNHP PPGLVKAWEG ERIHEECGSD 300 ELELTLGSSR TRADA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-23	6	80	372	446	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-23	6	80	372	446	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-23	6	80	372	446	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-23	6	80	372	446	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KP721490	2e-66	KP721490.1 Eucalyptus grandis brassinazole-resistant 1 protein (BES3) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008790049.1	0.0	protein BZR1 homolog 3-like
Swissprot	Q5Z9E5	1e-135	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A2H3ZQB9	0.0	A0A2H3ZQB9_PHODC; protein BZR1 homolog 3-like
STRING	XP_008790049.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-92	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]