PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s691361g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 242aa    MW: 27561.3 Da    PI: 5.4951
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s691361g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-135194755
                       HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                        +Er+RR++iN+++  Lr+++P+      +K++Ka+i + A+ YI++Lq
  PDK_30s691361g001 51 VMERNRRRQINERLYALRSVVPNI-----TKMDKASIIKDAISYIQELQ 94
                       69*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.76E-1836107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.7994493IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-165099IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.61E-145198No hitNo description
Gene3DG3DSA:4.10.280.107.5E-1751108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-115194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550215.67E-7161230No hitNo description
PROSITE profilePS516719.109164242IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MEAEYNFYWE TRRFLESEEL DSSWGLDEAI SGYYDPSSPD VASSTAAKNL VMERNRRRQI  60
NERLYALRSV VPNITKMDKA SIIKDAISYI QELQEQERRI LAEISELESG KQGRLPIGDT  120
KRDDAHFMQR NKKTRTSRGS PSFPSIEVIE MQLRVCEVGD RTLVVSIACN KKRDAMVKVC  180
EFFESLNLNI ITASITSVSG NLLHTLFVET DDMDRAELKG KIESAIAKLD AHRSPIYVMG  240
VQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008799483.11e-167transcription factor bHLH35-like isoform X1
SwissprotQ2HIV95e-74BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A2H3YIX11e-165A0A2H3YIX1_PHODC; transcription factor bHLH35-like isoform X1
STRINGXP_008799483.11e-166(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP104438133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.19e-76bHLH family protein