PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s684311g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 543aa    MW: 60647.9 Da    PI: 7.9143
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s684311g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.9e-12363407554
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        h + ErrRR+++N++f+ Lr llP++      K +Ka++L  + eY++ L
  PDK_30s684311g002 363 HMISERRRREKLNESFHALRMLLPPS-----SKKDKASVLSNTREYVNTL 407
                        8899********************98.....699************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.00E-11356412No hitNo description
SuperFamilySSF474592.22E-16357427IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.339358407IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-13359406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-9363407IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-12364413IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:1.20.5.4900.001407423No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MDSVFLLSAD DRRRFLQSAA RILGCSYICL WTALPRQSKY VTLSSPLSVV FLPSKTICPL  60
YHLILGATTS ISHLASIDGW HREDDSSHPS SSSGSLSRRL FEAYRNLRFS IDSGCVPGSA  120
YKEGIPYIEL GESELMNSAS MQIQRRFYQE ARIKTAIFMG CSSGEIELGM TMSDIMYAQT  180
NIQHVFSEDF VQHSLLGDPF PAPDQSKPSS SSSSLRSLSV GSPEYSGAPF MPEMTGEQAL  240
VVPPHQMTMQ AYARYRDVQL PTPASDDAAL TRAMLAVLST PSSSSPLFYQ SLRQDQAQHS  300
PRSRPVGSFQ AYNPAFAPIL EPQAAVHGQK MVKTAISILR RIHHMRYQTR MQEVRPTSNQ  360
LHHMISERRR REKLNESFHA LRMLLPPSSK KDKASVLSNT REYVNTLKAQ ISELEERNRM  420
LEMQLQPAVD IKEVGDSTER VEVQITRASE STSEAQRMNL IITVRVECNM IDLVLRIVER  480
LKEMGNISLV SVEASSGSPQ TNSFARSNFT LQVQASNWEE ESFKEAVKRV VDGVVAPPAT  540
TTP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1366371ERRRRE
2367372RRRREK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017697030.20.0putative transcription factor bHLH041
TrEMBLA0A2H3ZKU90.0A0A2H3ZKU9_PHODC; putative transcription factor bHLH041
STRINGXP_008782582.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39773367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.12e-42bHLH family protein