PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s681021g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 475aa    MW: 51472.2 Da    PI: 7.5335
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s681021g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.4e-31248306259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  PDK_30s681021g002 248 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDRSILITTYEGNHNHP 306
                        7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.2E-34232308IPR003657WRKY domain
SuperFamilySSF1182904.97E-28240308IPR003657WRKY domain
PROSITE profilePS5081129.631242308IPR003657WRKY domain
SMARTSM007743.1E-37247307IPR003657WRKY domain
PfamPF031065.0E-27249306IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MDFFSDEKKK RSREEPDLDI KVLSSSIKKE DLAINTGLNL RTANTGSDQS TVDEGLSPTE  60
DDKEDKSELA AMQAEVARMN EENQRLRGML NQVTTNYNAL QMHLVALIQQ RNQKNIGSPR  120
GHEAVDEKTD GKIVPRQFID LGPAANADEP SQSSTEGGSR HLSSSSPNNV EAGSMDYRRH  180
ENNTNKEIVP PDHERSNRED SPGPSSEGWN PNKAPKLSPS KTAEQTQEAT MRKARVSVRA  240
RSEAPMITDG CQWRKYGQKM AKGNPCPRAY YRCTMATGCP VRKQVQRCAE DRSILITTYE  300
GNHNHPLPPA AMAMASTTSA AASMLLSGSM SSTDGMMNSS FLARTILPCS SSMATISASA  360
PFPTVTLDLT RSPNPLQFQR PPIPFQVPFQ NGSPSFGSPA QPLSLPQVFG QTLSNQSKFS  420
GLQMSPDMEA AQFPHPKPPS ATSLADTANG NNNTSANNTT GNGNAKPANS NFLAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-22234310176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008784385.10.0probable WRKY transcription factor 31
SwissprotQ9XEC31e-133WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2H3XIS90.0A0A2H3XIS9_PHODC; probable WRKY transcription factor 31
STRINGXP_008784385.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22070.11e-118WRKY DNA-binding protein 31