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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PDK_30s671281g005 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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| Family |
LBD |
| Protein Properties |
Length: 187aa MW: 21089.3 Da PI: 7.7127 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s671281g005 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 104.8 | 7.1e-33 | 12 | 127 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeer................edamsslvyeAearardPvyGa 76
+CaaC++l rkC++dC+lapyfpa++p+kfa vhk+FGasnv+kll +l+++ eda++s+vyeA ar+rdPvyG+
PDK_30s671281g005 12 PCAACRTLHRKCSHDCMLAPYFPADEPEKFASVHKVFGASNVIKLLLRLRDSSFstttcashvmveegrrEDAVKSMVYEAYARLRDPVYGC 103
7*********************************************999666634567777888888888********************** PP
DUF260 77 vgvilklqqqleqlkaelallkee 100
+ i+ lq+ +e l+ +l +++e+
PDK_30s671281g005 104 TTAISYLQKCVEDLRGQLRTTREK 127
***************999998876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 187 aa
Download sequence Send
to blast |
MDSRLRARPD LPCAACRTLH RKCSHDCMLA PYFPADEPEK FASVHKVFGA SNVIKLLLRL 60
RDSSFSTTTC ASHVMVEEGR REDAVKSMVY EAYARLRDPV YGCTTAISYL QKCVEDLRGQ 120
LRTTREKVLE SQEQRDRLLR VLMDDPYLKP THLPAGGMVC GSGGSFMLDN MIHDGHCGTF 180
AESWPMI
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