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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
PDK_30s655121g001 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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| Family |
B3 |
| Protein Properties |
Length: 236aa MW: 26870.7 Da PI: 10.229 |
| Description |
B3 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s655121g001 | genome | PDK | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | B3 | 99.1 | 2.6e-31 | 66 | 165 | 1 | 94 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
f+k+ tpsdv+k++rlv+pk++ae+h + +++ l++ed g+ W+++++y+++s++yvltkGW++Fvk+++L++gD+v+F+++
PDK_30s655121g001 66 FDKAVTPSDVGKLNRLVIPKQHAEKHlplptgSAAACKGVLLSFEDAFGKMWRFRYSYWNSSQSYVLTKGWSRFVKEKRLQAGDVVTFQRST 157
89*************************9987533334899*************************************************875 PP
SSEE..EE CS
B3 87 rsefelvv 94
e+++++
PDK_30s655121g001 158 GPEKRFFI 165
55555565 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 236 aa
Download sequence Send
to blast |
MIDDILKESS KASNHQPLTE TDDEEEAELW FLRSRSKAEI VDMLRKHTYH DELQQSKRAF 60
RREHLFDKAV TPSDVGKLNR LVIPKQHAEK HLPLPTGSAA ACKGVLLSFE DAFGKMWRFR 120
YSYWNSSQSY VLTKGWSRFV KEKRLQAGDV VTFQRSTGPE KRFFIDWKPR AIGGRAEDGL 180
FQVVRLFGVN IIKTPAAAVG GDGGVGVVGW SKKGIRDMDQ LIPSPQHFKK QKIEAL
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Transcriptional repressor of flowering time on long day plants. Acts directly on FT expression by binding 5'-CAACA-3' and 5'-CACCTG-3 sequences (Probable). Functionally redundant with TEM1. {ECO:0000250, ECO:0000269|PubMed:18718758, ECO:0000305}. |
| Publications
? help Back to Top |
- Matías-Hernández L,Aguilar-Jaramillo AE,Marín-González E,Suárez-López P,Pelaz S
RAV genes: regulation of floral induction and beyond.
Ann. Bot., 2014. 114(7): p. 1459-70
[PMID:24812253] - Marín-González E, et al.
SHORT VEGETATIVE PHASE Up-Regulates TEMPRANILLO2 Floral Repressor at Low Ambient Temperatures.
Plant Physiol., 2015. 169(2): p. 1214-24
[PMID:26243615] - Sun YW, et al.
Attenuation of Histone Methyltransferase KRYPTONITE-mediated transcriptional gene silencing by Geminivirus.
Sci Rep, 2015. 5: p. 16476
[PMID:26602265] - Mittal A,Jiang Y,Ritchie GL,Burke JJ,Rock CD
AtRAV1 and AtRAV2 overexpression in cotton increases fiber length differentially under drought stress and delays flowering.
Plant Sci., 2015. 241: p. 78-95
[PMID:26706061] - Matías-Hernández L, et al.
TEMPRANILLO Reveals the Mesophyll as Crucial for Epidermal Trichome Formation.
Plant Physiol., 2016. 170(3): p. 1624-39
[PMID:26802039] - Li P, et al.
The Arabidopsis UGT87A2, a stress-inducible family 1 glycosyltransferase, is involved in the plant adaptation to abiotic stresses.
Physiol Plant, 2017. 159(4): p. 416-432
[PMID:27747895]
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