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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s65509539g002 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | bZIP | ||||||||
Protein Properties | Length: 308aa MW: 33780.9 Da PI: 9.7224 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36 | 1.5e-11 | 161 | 219 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR +A rs +RK ++i+eLe+kv++L++e ++L +l l+ +a l+s++ PDK_30s65509539g002 161 KRVKRILANRQSAARSKERKMKYIAELERKVQTLQTEATTLSAQLTLLQRDSAGLTSQN 219 899**************************************************999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.4E-19 | 157 | 221 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.967 | 159 | 222 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.4E-10 | 161 | 219 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.6E-12 | 161 | 218 | No hit | No description |
SuperFamily | SSF57959 | 2.53E-11 | 161 | 212 | No hit | No description |
CDD | cd14703 | 6.95E-23 | 162 | 213 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence Send to blast |
MNLESLDTLN SSEEKRGDLD SRASGTKTNG ADSSENEAES CVNEGGGSGV KLWPNHSPLV 60 QKREGAKRSA AGNPGPIGTT TRHCRSLSMD SCMGRLNFGE VSPKKPPSPG FLAAQTPQAN 120 SKDGASNMFS LEFGNGEFSP AEMKKIMANE KLLEMASTDP KRVKRILANR QSAARSKERK 180 MKYIAELERK VQTLQTEATT LSAQLTLLQR DSAGLTSQNN ELKFRLQAME QQAQLRDALN 240 EALTAEVQRL KLATGELVNG RASNSLNQQI PINPQMFQQQ QQQPAQLPLY QLQQQQQNNA 300 GMHQEAKK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008803311.1 | 0.0 | transcription factor RF2a-like | ||||
TrEMBL | A0A2H3ZWV9 | 0.0 | A0A2H3ZWV9_PHODC; transcription factor RF2a-like | ||||
STRING | XP_008803311.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3536 | 35 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 7e-86 | bZIP family protein |