|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PDK_30s1206201g001 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
Family |
ERF |
Protein Properties |
Length: 196aa MW: 21457.6 Da PI: 8.8661 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s1206201g001 | genome | PDK | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66 | 7.5e-21 | 27 | 76 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg++ taeeAa a+++a+++++g
PDK_30s1206201g001 27 HYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTYNTAEEAAMAYDEAALRFKG 76
7********.**********94....36***********************9987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 196 aa
Download sequence Send
to blast |
MAGPGSGSME RQLSQPSEEQ GNVRRRHYRG VRQRPWGKWA AEIRDPRKAA RVWLGTYNTA 60 EEAAMAYDEA ALRFKGTKAK LNFPERVQAR TDLGFLVSRG IPERPPEPIT PQAAASYPDL 120 LHYAQLLQSG DEDLQNVASG LFIGDPFTSG SSQVSQPSIA GSSQEFSDFS SQLGSSSSSS 180 SRPRGDQKDK DSNQQP
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional regulator of cell proliferation and axillary bud outgrowth. Involved in maintaining the structure of the shoot apical meristem as well as plastochron and phyllotaxy. Activates several genes involved in cell cycle regulation and dormancy breaking, including CYCD3-3, DPA, and BARD1. Strongly down-regulates DRM1, DRMH1, MARD1 and several genes encoding different types of cell wall-remodeling proteins. {ECO:0000269|PubMed:23616605}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Transiently up-regulated 6 to 15 hours after decapitation. {ECO:0000269|PubMed:23616605}. |