PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s1201081g002 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | bZIP | ||||||||
Protein Properties | Length: 414aa MW: 44874.9 Da PI: 6.3261 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.1 | 2.4e-10 | 228 | 286 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l +l+ l++e+ PDK_30s1201081g002 228 KRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATTLSAQLAMLQRDTTGLTAEN 286 9*********************************************9998877777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.5E-16 | 224 | 288 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.978 | 226 | 289 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.8E-11 | 228 | 280 | No hit | No description |
Pfam | PF00170 | 9.0E-9 | 228 | 281 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.3E-11 | 228 | 282 | No hit | No description |
CDD | cd14703 | 1.48E-24 | 229 | 278 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence Send to blast |
MEKDKSPVHG GVGGGGGGLP PPSSRYTVFA SPSRSFPVKC EASSSSSIAG AAPESGHFSR 60 AAVPDAGQFS HDISGMPDYP PRNVGHRRAQ SEILSLPDDI SFDSDLGVVG SGEGPSLSDE 120 TEEDPLSMYL DMDKFTSFSE TSGLDLPGIE TSVTAPAPAP SFPCHTENSA SASKERPRVR 180 HQHSQSMDGS TTIKPEMLAS GSEGPSLAET KKAMSAAKLA DLTLVDPKRA KRIWANRQSA 240 ARSKERKMRY ISELERKVQT LQTEATTLSA QLAMLQRDTT GLTAENNELK LRLQTMEQQV 300 HLQDALNDAL REEVQRLKIA TGQAVPSGGQ MINFGPSFGA TQQYYQHNPA MQSLLAAQQL 360 QQLQIHSQHL QQMHLQQHQP QVQQQQQQSP AELKMKGVMT SQRESTSDNS TSQE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008778608.1 | 0.0 | probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 1e-133 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A2H3X5F5 | 0.0 | A0A2H3X5F5_PHODC; probable transcription factor PosF21 | ||||
STRING | XP_008778608.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4269 | 38 | 68 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 1e-133 | bZIP family protein |
Publications ? help Back to Top | |||
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