 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PDK_30s1200411g002 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
WRKY |
| Protein Properties |
Length: 353aa MW: 39359.8 Da PI: 10.531 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s1200411g002 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 100.9 | 7.3e-32 | 286 | 344 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+
PDK_30s1200411g002 286 ADEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCVDDPSMLIVTYEGEHNHS 344
69************************9988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MEEVELANRA AVGSCHRVLN LLSRSQDQLL LYMNLVGETE VAVSRFRKVV SKLGHEVGHG 60
RVRRLNKALS PFNHKIFLDN PIASRPVPSP VPLHLLPRDP IEFPGRELGS TAKIPQPIPQ 120
RMFLENPVLD VDAASRSTLQ LGPQASPTHL HFLQQQQNNQ KFQLQQQLKF QSEMYRRSNS 180
GINLKFDNSS CSATGSSSRS FLSSLSVDGS MASLDGRPFH LTSGPESSNP TNLNQSPRRR 240
CSGRGEDGSG RCATAGRCHC SKKRKLRVKR SIKVPAISNK IADIPADEYS WRKYGQKPIK 300
GSPHPRGYYK CSSMRGCPAR KHVERCVDDP SMLIVTYEGE HNHSRLLTQL AHT
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
