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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PDK_30s1179991g004 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
AP2 |
| Protein Properties |
Length: 131aa MW: 15128.3 Da PI: 10.3442 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s1179991g004 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 43.5 | 7.8e-14 | 11 | 67 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g
PDK_30s1179991g004 11 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 67
57*******************6666777775555599******************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 131 aa
Download sequence Send
to blast |
MPPCAAGKRS SIYRGVTRHR WTGRYEAHLW DKSTWNQNQN KKGKQGAYDD EEAAARAYDL 60
AALKYWGAGT LINFPVSDYA RDLEEMQMVS KEEYLVSLRR KSSAFSRGFP KYRGLSRLIG 120
PLWKKLMVVF T
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
