PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1173941g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 359aa    MW: 40145.6 Da    PI: 9.1741
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1173941g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.64.8e-1275118245
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                         +++k+ rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  PDK_30s1173941g003  75 PADKVLRRLAQNREAARKSRLRKKAYVQQLESSRLKLSQLEQEL 118
                         689****************************9877777766544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-869119No hitNo description
SMARTSM003383.6E-874145IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.94476119IPR004827Basic-leucine zipper domain
PfamPF001702.2E-876118IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.94E-878118No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
PfamPF141446.8E-32165239IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MSSASAQFAT SRRIGIYEPN RQISMWGDSF KADSSQNTGA STIVEADAKH DNRLGDIPLE  60
SPGPSKKYDQ EANKPADKVL RRLAQNREAA RKSRLRKKAY VQQLESSRLK LSQLEQELEH  120
AKQQGVYVGG HLGDSSLGLS GTVNSGVAAF EMEYGHWVEE QNRQTGELRA ALQAHVSDIE  180
LRMLVESGMS HYDNLFHIKA IAAKSDVFYL MSGMWKTPAE RFFLWIGGFR PSELLKVLSP  240
QLEPLTEQQV VAVCNLQQSS QQAEDALSQG MDKLQQTLAE TLTSDPLGAS GLSKRLFIML  300
LTLTLFIKQA DHLRQQTLQQ MYKILTTRQA ARGLLVLGDY FQRLRALSSL WTARPHEPA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00586DAPTransfer from AT5G65210Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008801018.20.0transcription factor TGA4-like isoform X1
RefseqXP_026663546.10.0transcription factor TGAL6-like isoform X4
SwissprotA0A0P0WFC81e-154TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBLA0A2H3YN860.0A0A2H3YN86_PHODC; transcription factor TGA4-like isoform X1
TrEMBLA0A3Q0I9670.0A0A3Q0I967_PHODC; transcription factor TGAL6-like isoform X4
STRINGXP_008801018.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-148bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Okada A, et al.
    OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice.
    J. Biol. Chem., 2009. 284(39): p. 26510-8
    [PMID:19635799]
  3. Okada K
    The biosynthesis of isoprenoids and the mechanisms regulating it in plants.
    Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25
    [PMID:21737944]
  4. Yamane H
    Biosynthesis of phytoalexins and regulatory mechanisms of it in rice.
    Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8
    [PMID:23748776]
  5. Miyamoto K, et al.
    Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells.
    PLoS ONE, 2014. 9(8): p. e105823
    [PMID:25157897]
  6. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]