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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PDK_30s1169571g001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family |
ERF |
Protein Properties |
Length: 282aa MW: 29384.4 Da PI: 7.7309 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s1169571g001 | genome | PDK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 22 | 72 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
++ GVr+++ +grWvAeI+d ++ r +lg+f+tae+Aa+a+++a++ l+g+
PDK_30s1169571g001 22 RFIGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDQAARTLRGA 72
689******.7*********....4456*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MVGTVDGGLK ERRKKVSGEQ KRFIGVRQRP SGRWVAEIKD SLQKVRLWLG TFDTAEDAAR 60 AYDQAARTLR GANARTNFDS TSTPSGAGAT GGHDHPLEDM PPFSFEDHSG ESSEGLVGAL 120 QAKLLDGKLA NALGARLSLH AGRKEEAGVP NLGLWPTSST GQEAGVAARP LTGRKARLFL 180 SPSILDGPSS SSSSSSGVFS ASTGSTAAPT GGMSQSFDPC LGPQSSTRGK VEAAASASTD 240 RPDAQAPAGA KGFGSPSTIS FLTLEEDEES ARGPWDHRQL YI
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5wx9_A | 1e-15 | 16 | 78 | 8 | 71 | Ethylene-responsive transcription factor ERF096 |