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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PDK_30s1161861g003 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family |
ERF |
Protein Properties |
Length: 362aa MW: 38657.4 Da PI: 6.3658 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s1161861g003 | genome | PDK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.9 | 1.1e-17 | 63 | 111 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +gr++AeIrdp++ + r++lg+f+ta+eAa a+++a+++++g
PDK_30s1161861g003 63 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 111
56******.**********965...5************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MSSSKSLDTA APKAQGHNPP SVGFCQAKPS HSPSSSSSSS PPTTASSPPE RRGRRKPAEP 60 GRFLGVRRRP WGRYAAEIRD PTTKERHWLG TFDTAQEAAL AYDRAALSMK GTQARTNFIY 120 TDTPISTFHS LLTPYHSQNF TPPPMPPPPT QPHHLIGTAS MQTTNQNIPS QSQMSHFAFQ 180 SSGDNSTSPA FGSSVETGIG NNFLFSDDSR SGYLSSIIPE SCLRSSPKHS PPGQDNIISC 240 ELNAPILSPR NQVQSHGSTS ASSSYSATNG ALFDAHSGGV GAMSSEDFPC FTEMNSGFWV 300 DEPLWELNAC EFPTSTATSM GDLGTSSMQG PACGSLPQVS DSYSPSTSSL TDVFDLGYSF 360 EH
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the control of cell division patterns during the early lateral root primordium development. Acts downstream of auxin signaling (PubMed:17630277). Regulated by ARF7 and ARF19 in response to auxin. Co-acts with LBD16 and LBD18 to control lateral root development (PubMed:23749813). Involved in the determination of floral meristem identity and suppression of bract growth. Required for proper conversion of secondary inflorescences to flowers. Acts together with NPR5/BOP2 and NPR6/BOP1 to promote expression of LFY and AP1, two central regulators of floral meristem identity (PubMed:19482972). {ECO:0000250|UniProtKB:Q9LND1, ECO:0000269|PubMed:17630277, ECO:0000269|PubMed:19482972, ECO:0000269|PubMed:23749813}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By auxin. {ECO:0000269|PubMed:17630277, ECO:0000269|PubMed:23749813}. |