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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s1152681g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | bZIP | ||||||||
Protein Properties | Length: 233aa MW: 25729.3 Da PI: 6.2443 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.6 | 1.6e-09 | 3 | 31 | 8 | 36 |
HCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvk 36 rr+++NReAAr+sR+RKka++++Le PDK_30s1152681g001 3 RRLAQNREAARKSRLRKKAYVQQLESSRI 31 9***********************97433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0021 | 1 | 72 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.864 | 1 | 42 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 3.10E-22 | 1 | 52 | No hit | No description |
SuperFamily | SSF57959 | 4.25E-7 | 2 | 43 | No hit | No description |
Pfam | PF00170 | 7.3E-7 | 3 | 39 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 3 | 18 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.9E-8 | 3 | 44 | No hit | No description |
Pfam | PF14144 | 8.7E-32 | 80 | 155 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
TLRRLAQNRE AARKSRLRKK AYVQQLESSR IRLQQLEQEL QRARSQGLFL GGGSASGDLS 60 SGAAMFDMEY ARWLDDNSKH MSELRGGLQA HLPDGNLAVI VDECIAHYDE LFRLKGVAAK 120 SDVFHLLTGM WATPAERCFL WMGGFKPSEL LKILMPQLDP LTEQQLMGIC NLQQSSQQAE 180 EALSQGLEQL HQSLADTVAG GSLSDGADIT NYMGHMAIAL GKLANLEGFI QQV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008804825.3 | 1e-167 | transcription factor LG2 | ||||
Swissprot | O49067 | 1e-134 | LG2_MAIZE; Transcription factor LG2 | ||||
TrEMBL | A0A2H3YWG1 | 1e-166 | A0A2H3YWG1_PHODC; transcription factor LG2 | ||||
STRING | XP_008804825.1 | 1e-168 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4444 | 36 | 70 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 3e-87 | bZIP family protein |
Publications ? help Back to Top | |||
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