PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s1149691g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | NAC | ||||||||
Protein Properties | Length: 185aa MW: 21232.7 Da PI: 6.7962 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 70 | 6.3e-22 | 4 | 123 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 G+rF P d+elv eyL+++ +g++l+ + +i+e+ d y++ P++Lp +v +++ y+++ r+ r++r sgyWk+ k+++ PDK_30s1149691g001 4 LGVRFVPDDQELV-EYLRHHDAGRTLHSFGAINEAiDPYSFRPEELP-NV--RRDGSYYYADRNA------RNRRtLDGSGYWKSRDKQTK 84 69***********.***********99999999988***********.33..56789***99866......556634569*********** PP NAM 92 vlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128 +++ ++ vg k+ + f + +++++ ++W m ey+l PDK_30s1149691g001 85 IHT-DSGIVGYKRKFKFClgpSHLNSNSNPSKWKMTEYTL 123 **9.9999**********6554456777899*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.629 | 2 | 141 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.89E-24 | 4 | 140 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-14 | 5 | 123 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MEALGVRFVP DDQELVEYLR HHDAGRTLHS FGAINEAIDP YSFRPEELPN VRRDGSYYYA 60 DRNARNRRTL DGSGYWKSRD KQTKIHTDSG IVGYKRKFKF CLGPSHLNSN SNPSKWKMTE 120 YTLRPDTSHD TRKALCVIRM TAGNQGNEIR EAIPNPRLPE PDDEDIYGQL SPLLELDDMG 180 SLPSF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_026656324.1 | 5e-63 | NAC domain-containing protein 104-like | ||||
TrEMBL | A0A3Q0HPD4 | 1e-61 | A0A3Q0HPD4_PHODC; NAC domain-containing protein 104-like | ||||
STRING | XP_008779809.1 | 1e-132 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP29428 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56530.1 | 2e-11 | NAC domain containing protein 64 |