 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PDK_30s1148891g001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
|
| Family |
MYB_related |
| Protein Properties |
Length: 154aa MW: 17179.8 Da PI: 5.541 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PDK_30s1148891g001 | genome | PDK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 22.9 | 2e-07 | 1 | 24 | 24 | 48 |
HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
W+ a +++ gRt++++k++w+++l
PDK_30s1148891g001 1 WSMMATRLP-GRTDNEIKNYWNTHL 24
999******.************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 154 aa
Download sequence Send
to blast |
WSMMATRLPG RTDNEIKNYW NTHLRKKLLL MGIDPVTHRP KADLDLLAML PPLLAAAQNL 60
GNLTAPLDNV LRLQADAANL ARFQILQSLI QLTSITSPLD ADARNLLGSA SLQNYHQFSD 120
LLQMNHQLEG VMDGSLGLPQ NQIPFELQED SLLF
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that acts as negative regulator of lateral root (LR) development. Required for normal auxin responses during LR development. May be part of a negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place. {ECO:0000269|PubMed:24902892}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA), auxin and gravity in roots. {ECO:0000269|PubMed:24902892}. |
