PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1133641g020
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family TALE
Protein Properties Length: 670aa    MW: 73975 Da    PI: 5.7294
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1133641g020genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.32.9e-094314681954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yp+ +e+  LA+++gLt++q+++WF N R +
  PDK_30s1133641g020 431 FEHflHPYPKDSEKLMLARQTGLTKSQISNWFINARVR 468
                         664559******************************88 PP
2BELL110.97.2e-36294365172
                BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         erq lq+k + Ll +l+eVd+rYkqy+ q+q+v+ssF++vag+++akpYt+lAl++iSr+Fr L+dai +qi
  PDK_30s1133641g020 294 ERQGLQNKMTELLAMLDEVDRRYKQYYYQMQIVVSSFDVVAGCEAAKPYTALALQTISRQFRRLRDAINGQI 365
                         6899******************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.7E-47215363IPR006563POX domain
PfamPF075266.4E-45221361IPR006563POX domain
PROSITE profilePS5007112.212409472IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.8E-28411483IPR009057Homeodomain-like
SMARTSM003891.2E-9412476IPR001356Homeobox domain
CDDcd000867.76E-13412473No hitNo description
SuperFamilySSF466891.88E-17413479IPR009057Homeodomain-like
PfamPF059201.6E-17429468IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    Send to blast
MAAYYSSSTN QRDVTPTFYT RDPGHASYPE SSSTSNMIYP NYSSVPYSDK LAGNNQSQQN  60
GMDLPVPSSM ISHDLSTGGA GFASHLGERS YNALNDGRDE VLFMQTIDRS LTGVSDLVCS  120
SVADDPHMRV HTQLGILNGQ NVSLHQSNVS TAQCQGLSLS LSTEIPVPSF QFQPANSDIS  180
ILSTHQSNSG DGRAFRDDNS RYKLMHSNAS PYGLSSITST ISSSRYLKVA RQLLDEVVSV  240
RKALKQETDK TQSLDNSGGT AECKDSDEVS KCDGMSLNPQ ESNVQSPTEL SPSERQGLQN  300
KMTELLAMLD EVDRRYKQYY YQMQIVVSSF DVVAGCEAAK PYTALALQTI SRQFRRLRDA  360
INGQIRATRK SLGEQDNSSS KGVGISRLKY IDQQLRQQRA MQHLGMVQHN AWRPQRGLPE  420
TSVSILRAWL FEHFLHPYPK DSEKLMLARQ TGLTKSQISN WFINARVRLW KPMIEEMYKE  480
EIGETEMDSN SSTENVPKSK DETGSSEERE RSKSPATERC HMSQLDESFK SGISDMDMGE  540
TAAGFQNEAN ADDTFMNLML KDQRPVGGDG GLLHDAIAQR SDGSGRFSAY QMAELGMYGN  600
GGVSLTLGLQ HCDGGLPVSN SQKGYRRVGG QDAYSTAPPL EADAADYDCT NLMDPRHRFG  660
PSPLLHDFVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A2e-17418475158Homeobox protein Meis1
4xrs_B2e-17418475158Homeobox protein Meis1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008796599.10.0BEL1-like homeodomain protein 7 isoform X1
TrEMBLA0A2H3YC920.0A0A2H3YC92_PHODC; BEL1-like homeodomain protein 7 isoform X1
STRINGXP_008796599.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP90138131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-122BEL1-like homeodomain 7